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Articles in peer reviewed journals

   Galanthay, T. E., Krivan, V., Cressman, R. & Revilla, T.A. (2023) "Evolution of
   Aggression in Consumer-Resource Models", Dynamic Games and Applications. Vol. 13,
   pp. 1049-1065.

   [6][Abstract] [7][BibTeX] [8][DOI] [9][URL]
   Abstract: The Hawk--Dove model has been used to explain how aggression evolves in
   animal species. However, testing this model with experimental data has proven
   challenging because the two model parameters, V and C, are difficult to measure.
   We propose a novel consumer-resource model that overcomes these difficulties, and
   we explore the dynamical behavior of the model. Furthermore, by studying a series
   of consumer--resource models with interactions based on the Hawk--Dove game, we
   make new predictions for how the level of aggression may change with the richness
   of the environment, animal mortality, and the amount of time spent fighting.
   BibTeX:
@article{galanthay_etal-dyngameapp23,
  author  = {Galanthay, T. E. and K{\v{r}}ivan, V. and Cressman, R. and Revilla, T. A.},
  journal = {Dynamic Games and Applications},
  title   = {Evolution of Aggression in Consumer-Resource Models},
  year    = {2023},
  pages   = {1049--1065},
  volume  = {13},
  doi     = {10.1007/s13235-023-00496-w}
}

   Revilla, T.A. & Krivan, V. (2022) "Prey-predator dynamics with adaptive
   protection mutualism", Applied Mathematics and Computation. Vol. 433, pp. 127368.

   [10][Abstract] [11][BibTeX] [12][DOI] [13][URL]
   Abstract: Prey can ease the burden of exploitation by attracting a third party
   that interferes with their predators. Such is the case for plant-ant or aphid-ant
   mutualisms, where the victim supplies food to the ants, while the ants attack or
   drive away the offenders. Since ants are adaptive foragers, defense services can
   be altered by alternative food sources (e.g., other plants, or human-supplied
   resource). This article explores the prey-predator-ant system, using a model that
   combines predator-prey population dynamics with ant optimal foraging, where ants
   consume prey-supplied resources or alternative resources. Feedbacks between
   prey-predator dynamics and adaptive ant foraging leads to complex dynamics. For a
   given ant colony size and supply rate of alternative resources, prey can coexist
   with predators at alternative stable states, or along alternative limit cycles.
   Limit cycles extend the scope of defensive mutualism beyond the point where ants
   would abandon prey in favor of alternative resources under equilibrium
   conditions. These results highlight the importance of trait-mediated indirect
   interactions for natural mutualistic-antagonistic systems, and potential outcomes
   of manipulating ant defense services using baits in the case of agriculture.
   BibTeX:
@article{revilla_krivan-amc22,
  author   = {Revilla, T.A. and K{\v{r}}ivan, V.},
  journal  = {{A}pplied {M}athematics and {C}omputation},
  title    = {Prey-predator dynamics with adaptive protection mutualism},
  year     = {2022},
  volume   = {433},
  pages    = {127368},
  doi      = {10.1016/j.amc.2022.127368}
}

   Pardikes, N.A., Revilla, T.A., Lue, C.-H., Thierry, M., Souto-Vilarós, D. &
   Hrcek, J. (2022) "Effects of phenological mismatch under warming are modified by
   community context", Global Change Biology. Vol. 28, pp. 4013-4026.

   [14][Abstract] [15][BibTeX] [16][DOI] [17][URL]
   Abstract: Climate change is altering the relative timing of species interactions
   by shifting when species first appear in communities and modifying the duration
   organisms spend in each developmental stage. However, community contexts, such as
   intraspecific competition and alternative resource species, can prolong shortened
   windows of availability and may mitigate the effects of phenological shifts on
   species interactions. Using a combination of laboratory experiments and dynamic
   simulations, we quantified how the effects of phenological shifts in
   Drosophila-parasitoid interactions differed with concurrent changes in
   temperature, intraspecific competition, and the presence of alternative host
   species. Our study confirmed that warming shortens the window of host
   susceptibility. However, the presence of alternative host species sustained
   interaction persistence across a broader range of phenological shifts than
   pairwise interactions by increasing the degree of temporal overlap with suitable
   development stages between hosts and parasitoids. Irrespective of phenological
   shifts, parasitism rates declined under warming due to reduced parasitoid
   performance, which limited the ability of community context to manage temporally
   mismatched interactions. These results demonstrate that the ongoing decline in
   insect diversity may exacerbate the effects of phenological shifts in ecological
   communities under future global warming temperatures.
   BibTeX:
@article{pardikes_etal-gcb2022,
  author   = {N.A. Pardikes and T.A. Revilla and C.-H. Lue and M. Thierry and D. Souto-Vil
ar{\'{o}}s and J. Hr{\v{c}}ek},
  journal  = {{G}lobal {C}hange {B}iology},
  title    = {Effects of phenological mismatch under warming are modified by community con
text},
  year     = {2022},
  volume   = {28},
  number   = {13},
  pages    = {4013--4026},
  doi      = {10.1111/gcb.16195}
}

   Revilla, T.A., Marcou, T. & Krivan, V. (2021) "Plant competition under
   simultaneous adaptation by herbivores and pollinators", Ecological Modelling.
   Vol. 455, pp. 109634.

   [18][Abstract] [19][BibTeX] [20][DOI] [21][URL]
   Abstract: Two plants can influence one another indirectly by affecting population
   dynamics of shared exploiters and/or shared mutualists, giving rise to apparent
   competition or apparent mutualism, respectively. Indirect interactions between
   plants also occur when the preferences of exploiters and mutualists adapt to
   changes in relative plant densities. Here we study simultaneous effects of
   adaptive herbivore and pollinator preferences on the dynamics of two competing
   plant populations. As a result of feedbacks between plant dynamics and adaptive
   animal preferences, plants coexist at alternative stable states. This outcome is
   favored at low abundances of herbivores and pollinators when consumers tend to
   specialize on a single plant. As herbivore and pollinator abundances increase,
   generalism becomes more common. This promotes plant coexistence by balancing
   antagonistic and mutualistic effects between plants. Plant community dynamics
   become also more predictable due to reduction in the number of alternative stable
   states. This shows that the global decline in insect populations can lead to
   structural changes in plant communities that are difficult to predict.
   BibTeX:
@article{revilla_etal-ecomod21,
  author = {Revilla, T.A. and Marcou, T. and K{\v{r}}ivan, V.},
  title =     {Plant competition under simultaneous adaptation by herbivores and pollinato
rs},
  journal =   {{E}cological {M}odelling},
  year =      {2021},
  volume =    {455},
  pages =     {109634},
  doi =       {10.1016/j.ecolmodel.2021.109634}
}

   Krivan, V. (2019) & Revilla, T.A., "Plant coexistence mediated by adaptive
   foraging preferences of exploiters or mutualists", Journal of Theoretical
   Biology. Vol. 480, pp. 112-128.

   [22][Abstract] [23][BibTeX] [24][DOI] [25][URL]
   Abstract: Coexistence of plants depends on their competition for common resources
   and indirect interactions mediated by shared exploiters or mutualists. These
   interactions are driven either by changes in animal abundance (density-mediated
   interactions, e.g., apparent competition), or by changes in animal preferences
   for plants (behaviorally-mediated interactions). This article studies effects of
   behaviorally-mediated interactions on two plant population dynamics and animal
   preference dynamics when animal densities are fixed. Animals can be either
   adaptive exploiters or adaptive mutualists (e.g., herbivores or pollinators) that
   maximize their fitness. Analysis of the model shows that adaptive animal
   preferences for plants can lead to multiple outcomes of plant coexistence with
   different levels of specialization or generalism for the mediator animal species.
   In particular, exploiter generalism promotes plant coexistence even when
   inter-specific competition is too strong to make plant coexistence possible
   without exploiters, and mutualist specialization promotes plant coexistence at
   alternative stable states when plant inter-specific competition is weak.
   Introducing a new concept of generalized isoclines allows us to fully analyze the
   model with respect to the strength of competitive interactions between plants
   (weak or strong), and the type of interaction between plants and animals
   (exploitation or mutualism).
   BibTeX:
@article{krivan_revilla-jtb19,
  author = {K{\v{r}}ivan, V. and Revilla, T. A.},
  title =     {Plant coexistence mediated by adaptive foraging preferences of exploiters o
r mutualists},
  journal =   {{J}ournal of {T}heoretical {B}iology},
  year =      {2019},
  volume =    {480},
  pages =     {112--128},
  doi =       {10.1016/j.jtbi.2019.08.003}
}

   Revilla, T.A. & Krivan, V. (2018), "Competition, trait-mediated facilitation, and
   the structure of plant-pollinator communities", Journal of Theoretical Biology.
   Vol. 440, pp. 42-57.

   [26][Abstract] [27][BibTeX] [28][DOI] [29][URL]
   Abstract: In plant--pollinator communities many pollinators are potential
   generalists and their preferences for certain plants can change quickly in
   response to changes in plant and pollinator densities. These changes in
   preferences affect coexistence within pollinator guilds as well as within plant
   guilds. Using a mathematical model, we study how adaptations of pollinator
   preferences influence population dynamics of a two-plant--two-pollinator
   community interaction module. Adaptation leads to coexistence between generalist
   and specialist pollinators, and produces complex plant population dynamics,
   involving alternative stable states and discrete transitions in the plant
   community. Pollinator adaptation also leads to plant--plant apparent facilitation
   that is mediated by changes in pollinator preferences. We show that adaptive
   pollinator behavior reduces niche overlap and leads to coexistence by
   specialization on different plants. Thus, this article documents how adaptive
   pollinator preferences for plants change the structure and coexistence of
   plant--pollinator communities.
   BibTeX:
@article{revilla_krivan-jtb18,
  author = {Revilla, T. A. and K{\v{r}}ivan, V.},
  title = {Competition, trait-mediated facilitation, and the structure of plant-pollinator
 communities},
  journal = {Journal of Theoretical Biology},
  year = {2018},
  volume = {440},
  pages = {42--57},
  doi = {http://doi.org/10.1016/j.jtbi.2017.12.019}
}

   Revilla, T.A. & Krivan, V. (2016), "Pollinator Foraging Adaptation and
   Coexistence of Competing Plants", PLoS ONE. Vol. 11(8), pp. e0160076.

   [30][Abstract] [31][BibTeX] [32][DOI] [33][URL]
   Abstract: We use the optimal foraging theory to study coexistence between two
   plant species and a generalist pollinator. We compare conditions for plant
   coexistence for non-adaptive vs. adaptive pollinators that adjust their foraging
   strategy to maximize fitness. When pollinators have fixed preferences, we show
   that plant coexistence typically requires both weak competition between plants
   for resources (e.g., space or nutrients) and pollinator preferences that are not
   too biased in favour of either plant. We also show how plant coexistence is
   promoted by indirect facilitation via the pollinator. When pollinators are
   adaptive foragers, pollinator's diet maximizes pollinator's fitness measured as
   the per capita population growth rate. Simulations show that this has two
   conflicting consequences for plant coexistence. On the one hand, when competition
   between pollinators is weak, adaptation favours pollinator specialization on the
   more profitable plant which increases asymmetries in plant competition and makes
   their coexistence less likely. On the other hand, when competition between
   pollinators is strong, adaptation promotes generalism, which facilitates plant
   coexistence. In addition, adaptive foraging allows pollinators to survive sudden
   loss of the preferred plant host, thus preventing further collapse of the entire
   community.
   BibTeX:
@article{revilla_krivan-plosone16,
  author = {Revilla, T. A. and K{\v{r}}ivan, V.},
  title = {Pollinator Foraging Adaptation and Coexistence of Competing Plants},
  journal = {PLoS ONE},
  year = {2016},
  volume = {11},
  number = {8},
  pages = {e0160076},
  doi = {http://dx.doi.org/10.1371/journal.pone.0160076}
}

   Revilla, T.A. & Encinas-Viso, F. (2016), "Ecología y Evolución de la
   Endozoocoria", Acta Biologica Venezuelica. Vol. 35(2), pp. 187-215.

   [34][Abstract] [35][BibTeX] [36][URL] [37][URL]
   Abstract: La dispersión de semillas por animales juega un papel muy importante en
   el mantenimiento de la viabilidad de las poblaciones de plantas. Una de sus
   formas mas conspicuas es la endozoocoria, es decir la dispersión de semillas por
   frugívoros. En este trabajo construimos un modelo dinámico que considera varios
   aspectos esenciales de la endozoocoria, tales como el ciclo de vida de las
   plantas, y las características de consumo de los frugívoros. Con este modelo,
   encontramos que la supervivencia de las semillas a la frugivoría tiene una
   influencia desproporcionadamente grande sobre la abundancia vegetal. También
   encontramos que factores de regulación denso-dependientes hacen que los
   beneficios de la endozoocoria sean limitados. Tomando en consideración que las
   adaptaciones para la endozoocoria involucran costos para la planta, usamos
   nuestro modelo para estudiar la evolución de rasgos destinados a atraer animales.
   En condiciones de selección denso-independiente, la endozoocoria tiende a ser
   desfavorable si los costos involucrados son altos. En condiciones de selección
   denso-dependiente, la endozoocoria es favorable incluso cuando los costos son
   altos. Escenarios especiales de mortalidad denso-independientes y
   denso-dependientes, y de fisiología sensorial de los animales, contribuyen a la
   diversificación evolutiva de la endozoocoria.
   BibTeX:
@Article{revilla_encinas-abv16,
  author =    {Revilla, T. A. and Encinas-Viso, F.},
  title =     {{E}cología y {E}volución de la {E}ndozoocoria},
  journal =   {{A}cta {B}iologica {V}enezuelica},
  year =      {2016},
  volume =    {35},
  number =    {2},
  pages =     {187--215},
  owner =     {tommy},
  timestamp = {2016.05.24},
  url =       {http://190.169.94.12/ojs/index.php/revista_abv/article/view/10317}
}

   Revilla, T.A. (2015), "Numerical responses in resource-based mutualisms: a time
   scale approach", Journal of Theoretical Biology. Vol. 378, pp. 39-46.

   [38][Abstract] [39][BibTeX] [40][DOI] [41][URL]
   Abstract: Many mutualisms involve inter-specific resource exchanges, making
   consumer--resource approaches ideal for studying their dynamics. Also in many
   cases these resources are short lived (e.g. flowers) compared with the population
   dynamics of their producers and consumers (e.g. plants and insects), which
   justifies a separation of time scales. As a result, we can derive the numerical
   response of one species with respect to the abundance of another. For resource
   consumers, the numerical responses can account for intra-specific competition for
   mutualistic resources (e.g. nectar), thus connecting competition theory and
   mutualism mechanistically. For species that depend on services (e.g. pollination,
   seed dispersal), the numerical responses display saturation of benefits, with
   service handling times related with rates of resource production (e.g. flower
   turnover time). In both scenarios, competition and saturation have the same
   underlying cause, which is that resource production occurs at a finite velocity
   per individual, but their consumption tracks the much faster rates of population
   growth characterizing mutualisms. The resulting models display all the basic
   features seen in many models of facultative and obligate mutualisms, and they can
   be generalized from species pairs to larger communities
   BibTeX:
@article{revilla-jtb15,
  author = {Revilla, T. A.},
  title = {Numerical responses in resource-based mutualisms: a time scale approach},
  journal = {Journal of Theoretical Biology},
  year = {2015},
  volume = {378},
  pages = {39--46},
  note = {IF: 2.303},
  doi = {http://dx.doi.org/10.1016/j.jtbi.2015.04.012}
}

   Revilla, T.A. & Encinas-Viso, F. (2015), "Dynamical transitions in a
   pollination--herbivory interaction: a conflict between mutualism and antagonism",
   PLoS ONE. Vol. 10(2), pp. e0117964.

   [42][Abstract] [43][BibTeX] [44][DOI] [45][URL] [46][URL]
   Abstract: Plant-pollinator associations are often seen as purely mutualistic,
   while in reality they can be more complex. Indeed they may also display a diverse
   array of antagonistic interactions, such as competition and victim-exploiter
   interactions. In some cases mutualistic and antagonistic interactions are
   carried-out by the same species but at different life-stages. As a consequence,
   population structure affects the balance of inter-specific associations, a topic
   that is receiving increased attention. In this paper, we developed a model that
   captures the basic features of the interaction between a flowering plant and an
   insect with a larval stage that feeds on the plant's vegetative tissues (e.g.
   leaves) and an adult pollinator stage. Our model is able to display a rich set of
   dynamics, the most remarkable of which involves victim-exploiter oscillations
   that allow plants to attain abundances above their carrying capacities and the
   periodic alternation between states dominated by mutualism or antagonism. Our
   study indicates that changes in the insect's life cycle can modify the balance
   between mutualism and antagonism, causing important qualitative changes in the
   interaction dynamics. These changes in the life cycle could be caused by a
   variety of external drivers, such as temperature, plant nutrients, pesticides and
   changes in the diet of adult pollinators.
   BibTeX:
@article{revilla_encinas-plosone15,
  author = {Revilla, T. A. and Encinas-Viso, F.},
  title = {Dynamical transitions in a pollination--herbivory interaction: a conflict betwe
en mutualism and antagonism},
  journal = {PLoS ONE},
  year = {2015},
  volume = {10},
  number = {2},
  pages = {e0117964},
  doi = {http://dx.doi.org/10.1371/journal.pone.0117964}
}

   Revilla, T.A., Encinas-Viso, F. & Loreau, M. (2015), "Robustness of
   plant-pollinator networks under phenological change and habitat destruction",
   Oikos. Vol. 124(1), pp. 22-32.

   [47][Abstract] [48][BibTeX] [49][DOI] [50][URL]
   Abstract: Climate change can alter species phenologies and therefore disrupt
   species interactions. Habitat destruction can damage biodiversity and population
   viability. However, we still know very little about the potential effects of
   these two factors on the diversity and structure of interaction networks when
   both act simultaneously. Here we developed a mutualistic metacommunity model to
   explore the effects of habitat destruction and phenological changes on the
   diversity and structure of plant-pollinator networks. Using an empirical data set
   of plant and pollinator interactions and their duration in days, we simulated
   increasing levels of habitat destruction, under projected scenarios of
   phenological shifts as well for historically recorded changes in phenologies. On
   one hand, we found that habitat destruction causes catastrophic collapse in
   global diversity, as well as inducing alternative states. On the other hand,
   phenological shifts tend to make interactions weaker, increasing local extinction
   rates. Together, habitat destruction and phenological changes act
   synergistically, making metacommunities even more vulnerable to global collapse.
   Metacommunities are also more vulnerable to collapses under scenarios of
   historical change, in which phenologies are shortened, not just shifted.
   Furthermore, connectance and nestedness tends to decrease gradually with habitat
   destruction before the global collapse. Small phenological shifts can raise
   connectance slightly, due novel interactions appearing in a few generalist
   species, but larger shifts always reduce connectance. We conclude that the
   robustness of mutualistic metacommunities against habitat destruction can be
   greatly impaired by the weakening of positive interactions that results from the
   loss of phenological overlap.
   BibTeX:
@article{revilla_etal-oikos15,
  author = {Revilla, T. A. and Encinas-Viso, F. and Loreau, M.},
  title = {Robustness of plant-pollinator networks under phenological change and habitat d
estruction},
  journal = {Oikos},
  year = {2015},
  volume = {124},
  number = {1},
  pages = {22--32},
  doi = {http://dx.doi.org/10.1111/oik.01532}
}

   Encinas-Viso, F., Revilla, T.A. & Etienne, R.S. (2014), "Shifts in pollinator
   population structure may jeopardize pollination service", Journal of Theoretical
   Biology. Vol. 352, pp. 24-30.

   [51][Abstract] [52][BibTeX] [53][DOI] [54][URL]
   Abstract: Plant-pollinator interactions are among the best known and ubiquitous
   plant-animal mutualisms and are crucial for ecosystem functioning and the
   maintenance of biodiversity. Most pollinators are insects with several
   life-stages (e.g. egg, larva, pupa, adult) and the mutualistic interaction
   depends on the pollinator surviving these different life-stages. However, to our
   knowledge, pollinator population structure has been ignored in most theoretical
   models of plant-pollinator dynamics, and we lack understanding of the role of
   different life-stages in determining the stability of the mutualism. Here we
   therefore develop a simple plant-pollinator model with a facultative plant and an
   obligate pollinator with stage-structure. Our model predicts a globally stable
   equilibrium when pollinator demography is dominated by adults and a locally
   stable equilibrium when the plants are strongly dependent on pollination and
   pollinator demography is dominated by the larval stage. In the latter case, the
   mutualism is vulnerable to fluctuations in the pollinator population size or
   structure caused by external factors (e.g. pesticides) reducing larval
   development and increasing adult mortality. This may cause a sudden collapse
   rather than gradual decrease of the mutualism, after which the pollination
   service cannot be recovered by reducing these detrimental external factors, but
   must be accompanied by large increases in pollinator populations. This highlights
   the importance of considering population structure in plant-pollinator
   interactions.
   BibTeX:
@article{encinas-viso_etal-jtb14,
  author = {Encinas-Viso, F. and Revilla, T. A. and Etienne, R. S.},
  title = {Shifts in pollinator population structure may jeopardize pollination service},
  journal = {Journal of Theoretical Biology},
  year = {2014}
  volume = {352},
  pages = {24--30},
  doi = {http://dx.doi.org/10.1016/j.jtbi.2014.02.030}
}

   Encinas-Viso, F., Revilla, T.A., van Velzen, E. & Etienne, R.S. (2014),
   "Frugivores and cheap fruits make fruiting fruitful", Journal of Evolutionary
   Biology. Vol. 27(2), pp. 313-324.

   [55][Abstract] [56][BibTeX] [57][DOI] [58][URL] [59][URL]
   Abstract: Animal seed dispersal provides an important ecosystem service by
   strongly benefiting plant communities. There are several theoretical studies on
   the ecology of plant-animal seed-disperser interactions, but few studies have
   explored the evolution of this mutualism. Moreover, these studies ignore plant
   life-history and frugivore foraging behavior. Thus, it remains an open question
   what the conditions for the diversification of fruit traits are, in spite of the
   multitude of empirical studies on fruit trait diversity. Here we study the
   evolution of fruit traits using a spatially-explicit individual-based model,
   which considers the costs associated with adaptations inducing dispersal by
   frugivory, as well as frugivore foraging behavior and abundance. Our model
   predicts that these costs are the main determinants of the evolution of fruit
   traits, and that when the costs are not very high, the evolution of larger fruit
   traits (e.g. fleshy/colorful fruits) is controlled by the choosiness and response
   thresholds of the frugivores as well as their numerical abundance.
   BibTeX:
@article{encinas_etal-jeb14,
  author = {Encinas-Viso, F. and Revilla, T. A. and van Velzen, E. and Etienne, R. S.},
  title = {Frugivores and cheap fruits make fruiting fruitful},
  journal = {Journal of Evolutionary Biology},
  year = {2014},
  volume = {27},
  number = {2},
  pages = {865--877},
  doi = {http://dx.doi.org/10.1111/jeb.12301}
}

   Revilla, T.A., Encinas-Viso, F. & Loreau, M. (2014), "(A bit) Earlier or later is
   always better: Phenological shifts in consumer-resource interactions",
   Theoretical Ecology. Vol. 7(2), pp. 149-162.

   [60][Abstract] [61][BibTeX] [62][DOI] [63][URL]
   Abstract: Phenology is a crucial life-history trait for species interactions and
   it can have great repercussions on the persistence of communities and ecosystems.
   Changes in phenology caused by climate change can disrupt species interactions
   causing decreases in consumer growth rates, as suggested by the Match Mismatch
   Hypothesis (MMH). However, it is still not clear what the long-term consequences
   of such phenological changes are. In this paper we present models in which
   phenology and consumer-resource feedbacks determine long-term community dynamics.
   Our results show that consumer viability is constrained by limits in the amount
   of phenological mismatch with their resources, in accordance with the MMH. But
   the effects of phenological shifts are often non-monotonic. Consumers generally
   have higher abundances when they recruit some time before or after their
   resources because this reduces the long-term effects of overexploitation that
   would otherwise occur under closer synchrony. Changes in the duration of
   recruitment phenologies also have important impacts on community stability, with
   shorter phenologies promoting oscillations and cycles. For small community
   modules, the effects of phenological shifts on populations can be explained, to a
   great extent, as superpositions of their effects on consumer-resource pairs. We
   highlight that consumer-resource feedbacks and overexploitation, which are not
   typically considered in phenological models, are important factors shaping the
   long-term responses to phenological changes caused by climate change.
   BibTeX:
@article{revilla_etal-theorecol13,
  author = {Revilla, T. A. and Encinas-Viso, F. and Loreau, M.},
  title = {(A bit) Earlier or later is always better: Phenological shifts in consumer-reso
urce interactions},
  journal = {Theoretical Ecology},
  year = {2014},
  volume = {7},
  number = {2},
  pages = {149-162},
  doi = {http://dx.doi.org/10.1007/s12080-013-0207-3}
}

   Encinas-Viso, F., Revilla, T.A. & Etienne, R.S. (2012), "Phenology drives
   mutualistic network structure and diversity", Ecology Letters. Vol. 15(3), pp.
   198-208.

   [64][Abstract] [65][BibTeX] [66][DOI] [67][URL]
   Abstract: Several network properties have been identified as determinants of the
   stability and complexity of mutualistic networks. However, it is unclear which
   mechanisms give rise to these network properties. Phenology seems important,
   because it shapes the topology of mutualistic networks, but its effects on the
   dynamics of mutualistic networks have scarcely been studied. Here, we study these
   effects with a general dynamical model of mutualistic and competitive
   interactions where the interaction strength depends on the temporal overlap
   between species resulting from their phenologies. We find a negative
   complexity-stability relationship, where phenologies maximising mutualistic
   interactions and minimising intraguild competitive interactions generate
   speciose, nested and poorly connected networks with moderate asymmetry and low
   resilience. Moreover, lengthening the season increases diversity and resilience.
   This highlights the fragility of real mutualistic communities with short seasons
   (e.g. Arctic environments) to drastic environmental changes.
   BibTeX:
@article{encinas_etal-ecolett12,
  author = {Encinas-Viso, F. and Revilla, T. A. and Etienne, R. S.},
  title = {Phenology drives mutualistic network structure and diversity},
  journal = {Ecology Letters},
  year = {2012},
  volume = {15},
  number = {3},
  pages = {198--208},
  doi = {http://dx.doi.org/10.1111/j.1461-0248.2011.01726.x}
}

   Revilla, T.A., Veen, G.F., M.B. Eppinga, M.B. & Weissing, F.J. (2012),
   "Plant-soil feedbacks and the coexistence of competing plants", Theoretical
   Ecology. Vol. 6(2), pp. 99-113.

   [68][Abstract] [69][BibTeX] [70][DOI] [71][URL]
   Abstract: Plant-soil feedbacks can have important implications for the
   interactions among plants. Understanding these effects is a major challenge since
   it is inherently difficult to measure and manipulate highly diverse soil
   communities. Mathematical models may advance this understanding by making the
   interplay of the various processes affecting plant-soil interaction explicit and
   by quantifying the relative importance of the factors involved. The aim of this
   paper is to provide a complete analysis of a pioneering plant-soil feedback model
   developed by Bever and colleagues (J Ecol 85: 561-573, 1997; Ecol Lett 2: 52-62,
   1999; New Phytol 157: 465-473, 2003) to fully understand the range of possible
   impacts of plant-soil feedbacks on plant communities within this framework. We
   analyze this model by means of a new graphical method that provides a complete
   classification of the potential effects of soil communities on plant competition.
   Due to the graphical character of the method, the results are relatively easy to
   obtain and understand. We show that plant diversity depends crucially on two key
   parameters that may be viewed as measures of the intensity of plant competition
   and the direction and strength of plant-soil feedback, respectively. Our analysis
   provides a formal underpinning of earlier claims that plant-soil feedbacks,
   especially when they are negative, may enhance the diversity of plant
   communities. In particular, negative plant-soil feedbacks can enhance the range
   of plant coexistence by inducing competitive oscillations. However, these
   oscillations can also destabilize plant coexistence, leading to low population
   densities and extinctions. In addition, positive feedbacks can allow locally
   stable forms of plant coexistence by inducing alternative stable states. Our
   findings highlight that the inclusion of plant-soil interactions may
   fundamentally alter the predictions on the structure and functioning of
   above-ground ecosystems. The scenarios presented in this study can be used to
   formulate hypotheses about the ways soil community effects may influence plant
   competition that can be tested with empirical studies. This will advance our
   understanding of the role of plant-soil feedback in ecological communities.
   BibTeX:
@article{revilla_etal-theorecol12,
  author = {Revilla, T. A. and Veen, G. F. and M. B. Eppinga, M. B. and Weissing, F. J.},
  title = {Plant-soil feedbacks and the coexistence of competing plants},
  journal = {Theoretical Ecology},
  year = {2012},
  volume = {6},
  number = {2},
  pages = {99-113},
  doi = {http://dx.doi.org/10.1007/s12080-012-0163-3}
}

   Revilla, T.A. & Weissing, F.J. (2008), "Nonequilibrium coexistence in a
   competition model with nutrient storage", Ecology. Vol. 89(3), pp. 865-877.

   [72][Abstract] [73][BibTeX] [74][DOI] [75][URL]
   Abstract: Resource competition theory predicts that, in equilibrium, the number
   of coexisting species cannot exceed the number of limiting resources. In some
   competition models, however, competitive interactions may result in
   nonequilibrium dynamics, allowing the coexistence of many species on few
   resources. The relevance of these findings is still unclear, since some
   assumptions of the underlying models are unrealistic. Most importantly, these
   models assume that individual growth directly reflects the availability of
   external resources, whereas real organisms can store resources, thereby
   decoupling their growth from external fluctuations. Here we study the effects of
   resource storage by extending the well-known Droop model to the context of
   multiple species and multiple resources. We demonstrate that the extended Droop
   model shows virtually the same complex dynamics as models without storage.
   Depending on the model parameters, one may obtain competitive exclusion, stable
   equilibrium coexistence, periodic and non-periodic oscillations, and chaos.
   Again, nonequilibrium dynamics allows for the coexistence of many species on few
   resources. We discuss our findings in the light of earlier work on resource
   competition, highlighting the role of luxury consumption, trade-offs in
   competitive abilities, and ecological stoichiometry.
   BibTeX:
@article{revilla_weissing-ecology08,
  author = {Revilla, T. A. and Weissing, F. J.},
  title = {Nonequilibrium coexistence in a competition model with nutrient storage},
  journal = {Ecology},
  year = {2008},
  volume = {89},
  number = {3},
  pages = {865-877},
  doi = {http://dx.doi.org/10.1890/07-1103.1}
}

   Chaves, L.F., Hernandez, M.J., Revilla, T.A., Rodríguez, D.J. & Rabinovich, J.E.
   (2004), "Mortality profiles of Rhodnius prolixus (Heteroptera: Reduviidae),
   vector of Chagas disease", Acta Tropica. Vol. 92(2), pp. 119-125.

   [76][Abstract] [77][BibTeX] [78][DOI] [79][URL]
   Abstract: Life table data of Rhodnius prolixus (Heteroptera: Reduviidae) kept at
   laboratory conditions were analysed in search for mortality patterns. Gompertz
   and Weibull mortality models seem adequate to explain the sigmoid shape of the
   survivorship curve. A significant fit was obtained with both models for females
   (R^2 = 0.70, P < 0.0005 for the Gompertz model; R^2 = 0.78, P < 0.0005 for the
   Weibull model) and for males (R^2 = 0.39, P < 0.0005 for the Gompertz model; R^2
   = 0.48, P < 0.0005 for the Weibull model). The mortality parameter (b) is higher
   for females in Gompertz and Weibull models, using smoothed and non-smoothed data
   (P < 0.05), revealing a significant sex mortality differential. Given the
   particular life history of this insect, the non-linear relationship between the
   force of mortality and age may have an important impact in the vectorial capacity
   of R. prolixus as Chagas disease vector, and its consideration should be included
   as an important factor in the transmission of Trypanosoma cruzi by triatomines.
   BibTeX:
@article{chaves_etal-actatrop02,
  author = {Chaves, L. F. and Hernandez, M. J. and Revilla, T. A. and Rodríguez, D. J. and
 Rabinovich, J. E.},
  title = {Mortality profiles of Rhodnius prolixus (Heteroptera: Reduviidae), vector of Ch
agas disease},
  journal = {Acta Tropica},
  year = {2004},
  volume = {92},
  number = {2},
  pages = {119-125},
  doi = {http://dx.doi.org/10.1016/j.actatropica.2004.06.005}
}

   Revilla, T.A. & García-Ramos, G. (2003), "Fighting a virus with a virus: a
   dynamic model for HIV-1 therapy", Mathematical Biosciences. Vol. 185(2), pp.
   191-203.

   [80][Abstract] [81][BibTeX] [82][DOI] [83][URL]
   Abstract: A mathematical model examined a potential therapy for controlling viral
   infections using genetically modified viruses. The control of the infection is an
   indirect effect of the selective elimination by an engineered virus of infected
   cells that are the source of the pathogens. Therefore, this engineered virus
   could greatly compensate for a dysfunctional immune system compromised by AIDS.
   In vitro studies using engineered viruses have been shown to decrease the HIV-1
   load about 1000-fold. However, the efficacy of this potential treatment for
   reducing the viral load in AIDS patients is unknown. The present model studied
   the interactions among the HIV-1 virus, its main host cell (activated CD4+ T
   cells), and a therapeutic engineered virus in an in vivo context; and it examined
   the conditions for controlling the pathogen. This model predicted a significant
   drop in the HIV-1 load, but the treatment does not eradicate HIV. A basic
   estimation using a currently engineered virus indicated an HIV-1 load reduction
   of 92% and a recovery of host cells to 17% of their normal level. Greater success
   (98% HIV reduction, 44% host cells recovery) is expected as more competent
   engineered viruses are designed. These results suggest that therapy using viruses
   could be an alternative to extend the survival of AIDS patients.
   BibTeX:
@article{revilla_garcia-mathbios03,
  author = {Revilla, T. A. and García-Ramos, G.},
  title = {Fighting a virus with a virus: a dynamic model for HIV-1 therapy},
  journal = {Mathematical Biosciences},
  year = {2003},
  volume = {185},
  number = {2},
  pages = {191-203},
  doi = {http://dx.doi.org/10.1016/S0025-5564(03)00091-9}
}

   Revilla, T.A. (2002), "Effects of Intraguild Predation on Resource Competition",
   Journal of Theoretical Biology. Vol. 214(1), pp. 49-62.

   [84][Abstract] [85][BibTeX] [86][DOI] [87][URL]
   Abstract: In this work, a simple Lotka-Volterra model of intraguild predation
   with three species is analysed, searching for the effect of the top predator on
   the coexistence with its prey-competitor species. Apart from the well-known
   result that the intraguild prey must be superior in the competition for the
   shared prey in order to make coexistence possible, the magnitude of intraguild
   predation and the form by which the intraguild predator makes use of the
   intraguild prey have important consequences upon the dynamics, extending or
   restricting the possibilities of coexistence. These results are easily obtained
   by nullcline analysis. Also, some interesting results are obtained for the same
   model but including saturating functional response.
   BibTeX:
@article{revilla-jtb02,
  author = {Revilla, T. A.},
  title = {Effects of Intraguild Predation on Resource Competition},
  journal = {Journal of Theoretical Biology},
  year = {2002},
  volume = {214},
  number = {1},
  pages = {49-62},
  doi = {http://dx.doi.org/10.1006/jtbi.2001.2448}
}

   Revilla, T.A. (2000), "Resource Competition in Stage-structured Populations",
   Journal of Theoretical Biology. Vol. 204(2), pp. 289-298.

   [88][Abstract] [89][BibTeX] [90][DOI] [91][URL]
   Abstract: Two models are made to account for the dynamics of a consumer-resource
   system in which the consumers are divided into juveniles and adults. The resource
   grows logistically and a type II functional response is assumed for consumers.
   Resource levels determine fecundity and maturation rates in one model, and
   mortality rates in the other. The analysis of the models shows that the condition
   for establishment of consumers is that the product of per capita fecundity rate
   and maturation rates is higher than the product of juvenile and adult per capita
   decay rates at a resource level equal to its carrying capacity. This result
   imposes a minimal abundance of resource able to maintain the consumers. A second
   result shows an equilibrium stage structure, with a small instability when
   juveniles and adults mean saturation constants are different. The implications of
   these results for community dynamics are discussed.
   BibTeX:
@article{revilla-jtb00,
  author = {Revilla, T. A.},
  title = {Resource Competition in Stage-structured Populations},
  journal = {Journal of Theoretical Biology},
  year = {2000},
  volume = {204},
  number = {2},
  pages = {289-298},
  doi = {http://dx.doi.org/10.1006/jtbi.2000.2017}
}

                         < ~~~~ ~~~~ ~~~~ ~~~~ >

Other publications

   Revilla, T.A. & Encinas-Viso, F. (2015), "Ecología y evolución de la
   endozoocoria", In Modelos y Simulaciones Biológicas: Ecología y Evolución.
   Cipriani, R. & de Vladar, H. (ed.). Createspace, ISBN: 978-1516867561,
   1516867564.

   [92][Abstract] [93][BibTeX] [94][URL] [95][PDF]
   Abstract: En muchas ocasiones la interacción entre plantas y animales puede
   conducir a un mutualismo: el animal obtiene energía mientras que la planta recibe
   los beneficios ecológicos de la dispersión. La zoocoria, el proceso de dispersión
   por agentes animales, es muy importante para el mantenimiento de la viabilidad
   las poblaciones de plantas. Una de las formas mas conspicuas de zoocoria es la
   endozoocoria, es decir, la dispersión por parte de animales que consumen
   propágulos vegetales (e.g. frugívoros). En este trabajo construimos un modelo
   dinámico que considera varios aspectos esenciales de la endozoocoria. Con este
   modelo, encontramos que la supervivencia de las semillas a la frugivoría tiene
   una influencia desproporcionadamente grande sobre la abundancia vegetal. También
   concluimos que los factores de regulación denso-dependientes hacen que los
   beneficios de la endozoocoria sean limitados. Tomando en consideración que las
   adaptaciones para la endozoocoria involucran costos para la planta, usamos
   nuestro modelo para estudiar la evolución de rasgos destinados a atraer animales.
   En condiciones de selección denso-independiente encontramos que la endozoocoria
   tiende a ser desfavorable si los costos involucrados son altos, mientras que para
   condiciones denso-dependientes esta tiende a ser favorable incluso si los costos
   son altos. Finalmente, concluimos que el balance apropiado entre factores de
   mortalidad denso-independientes vs denso-dependientes, y la fisiología sensorial
   de los animales, puede contribuir a la diversificación evolutiva de la
   endozoocoria.
   BibTeX:
@incollection{revillaencinas2014,
  author = {Revilla, T. A. and Encinas-Viso, F.},
  title = {Ecología y Evolución de la Endozoocoria},
  booktitle = {Modelos y Simulaciones Biológicas: Ecología y Evolución},
  Publisher = {Createspace. ISBN: 978-1516867561, 1516867564},
  Year = {2015},
  Editor = {Cipriani, R. and de Vladar, H.P.}
  url = {https://www.parmenides-foundation.org/publication/publication-details/ModSimBioEE
/}
}

   Revilla, T.A. (2010), "Multispecies Resource Competition". PhD Thesis: University
   of Groningen.

   [96][Abstract] [97][BibTeX] [98][URL]
   Abstract: The main focus of this thesis is the study of competition for resources
   among many species, from a theoretical position. This is accomplished using the
   "nutrient storage model" of algal competition. This model is of considerable
   relevance in plankton ecology and in the field of ecological stoichiometry.
   Unfortunately, previous research considered just a few species in contrast with
   the hundreds that are present in real communities. Thanks to analytical and
   numerical approaches, we can conclude that multispecies competition models with
   nutrient storage display a rich and complicated dynamics including oscillations,
   chaos and the coexistence of many species on few resources. To a great extent,
   the different dynamics are the consequence of specific trade-offs in the species
   consumption policies, which is also the case for less realistic models of
   resource competition. In addition, the comparison with other models reveal that
   there are general rules governing the multispecies dynamics, and such rules are
   independent of the underlying mechanisms. This robustness is good news for a
   niche based perspective of community ecology, in which diversity is the
   consequence of the species properties. However, the addition of more mechanistic
   detail, like the introduction of nutrient storage, reveals that predictability
   becomes rather difficult, not to say pointless, because very small variation in
   biological parameters or initial conditions can lead to equilibrium coexistence,
   nonequilibrium coexistence, chaotic dynamics, or competitive exclusion. The
   implication of these contrasting results is that competitive communities may
   behave in a consistent way from a statistical perspective, but not in a case by
   case basis.
   BibTeX:
@phdthesis{mythesis2010,
  author = {Revilla, T. A.},
  title = {Multispecies Resource Competition},
  school = {University of Groningen},
  year = {2010},
}

   Revilla, T.A. (2013), "Changement climatique: synchronisation des espèces et
   modélisation", In Ariège, terre de science, Collection Petit Illustré. (19), pp.
   16. La Dépêche du Midi / CNRS.

   [99][Abstract] [100][BibTeX] [101][URL] [102][JPG]
   Abstract: L'étude des variations que les climats font subir aux différenres
   espèces végétales et animales permet de mieux comprendre les conséquences de ces
   changements.
   BibTeX:
@incollection{revilla-depeche13,
  author = {Revilla, T. A.},
  title = {Changement climatique: synchronisation des espèces et modélisation},
  booktitle = {Ariège, terre de science, Collection Petit Illustré},
  publisher = {La Dépêche du Midi / CNRS},
  year = {2013},
  number = {19},
  pages = {16},
  url = {http://www.ladepeche.fr/article/2013/10/09/1726476-foix-ariege-terre-de-sciences.
html}
}

   Arnoldi, J-F., Haegeman, B., Revilla, T.A. & Loreau, M. (2016), "Particularity of
   'Universal resilience patterns in complex networks'" , BioRxiv:056218.

   [103][Abstract] [104][BibTeX] [105][URL]
   Abstract: In a recent Letter to Nature, Gao, Barzel and Barab&aacutesi describe
   an elegant procedure to reduce the dimensionality of complex dynamical networks,
   which they claim reveals "universal patterns of network resilience", offering
   "ways to prevent the collapse of ecological, biological or economic systems, and
   guiding the design of technological systems resilient to both internal failures
   and environmental changes". However, Gao et al restrict their attention to
   systems for which all interactions between nodes are mutualistic. Since
   antagonism is ubiquitous in natural and social networks, we clarify why this
   stringent hypothesis is necessary and what happens when it is relaxed. By
   analysing broad classes of competitive and predator-prey networks we provide
   novel insights into the underlying mechanisms at work in Gao et al's theory, and
   novel predictions for dynamical systems that are not purely mutualistic.
   BibTeX:
@article{Arnoldi056218,
  author = {Arnoldi, Jean-Fran{\c c}ois and Haegeman, Bart and Revilla, Tom{\'a}s and Lore
au, Michel},
  title = {Particularity of {\textquotedblleft}Universal resilience patterns in complex ne
tworks{\textquotedblright}},
  year = {2016},
  doi = {10.1101/056218},
  publisher = {Cold Spring Harbor Labs Journals},
  URL = {http://biorxiv.org/content/early/2016/05/31/056218},
  eprint = {http://biorxiv.org/content/early/2016/05/31/056218.full.pdf},
  journal = {bioRxiv}
}

                         < ~~~~ ~~~~ ~~~~ ~~~~ >

Preprints, drafts, or in review

   [106]Google scholar link

   [107]arXiv.org link

                         < ~~~~ ~~~~ ~~~~ ~~~~ >
     ____________________________________________________________________________

           [108]Home [109]Contact [110]Research [111]Publications [112]Links


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 101. http://www.ladepeche.fr/article/2013/10/09/1726476-foix-ariege-terre-de-sciences.html
 102. http://tomrevilla.sdf.org/files/revilla-depeche13.jpg
 103. javascript:toggleInfo('arnoldietal16','abstract')
 104. javascript:toggleInfo('arnoldietal16','bibtex')
 105. http://biorxiv.org/content/early/2016/05/31/056218
 106. http://scholar.google.fr/citations?user=TvG4AB4AAAAJ
 107. https://arxiv.org/find/q-bio/1/au:+Revilla_T/0/1/0/all/0/1
 108. http://tomrevilla.sdf.org/index.html
 109. http://tomrevilla.sdf.org/contact.html
 110. http://tomrevilla.sdf.org/research.html
 111. http://tomrevilla.sdf.org/pubs.html
 112. http://tomrevilla.sdf.org/links.html


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